科研日报 2026-11-02
📅 Daily Report - 2026-11-02
今日筛选出 88 条内容,来自 2 个来源
🤖 今日AI智能总结
🧬 数据前沿
今日焦点: 单细胞测序技术在肿瘤免疫逃逸机制(如结直肠癌、黑色素瘤)和神经系统发育研究中取得重要进展。
主要方向:
- 肿瘤免疫与耐药机制:揭示线粒体复合物I在结直肠癌免疫逃逸和耐药中的作用;探讨单细胞RNA测序在 oral squamous cell carcinoma (OSCC) 中的应用。
- 神经系统发育调控:利用ChIP-Seq、ATAC-Seq和RNA-seq研究哺乳动物神经系统发育中的染色质重塑因子。
- 免疫疾病与治疗:分析单细胞RNA测序揭示冰毒对肝脏免疫反应的影响;研究TCR-T细胞在肿瘤治疗中的作用;评估化疗、病毒疗法对肿瘤免疫环境的影响。
技术亮点:
- 多组学整合分析:结合TCGA数据、CRISPR筛选、单细胞RNA测序等技术,深入解析复杂生物学过程。
- 新型单细胞技术应用:单细胞多组学分析(染色质状态与转录组)用于研究基底神经节。
🧪 博客更新
今日焦点: 一项突破性研究揭示了常见肠道细菌引发结直肠癌的机制,另一项研究则开发出能在症状出现前十年预测阿尔茨海默病风险的血液检测方法。
主要方向:
- 肠道菌群与结直肠癌的关联机制
- 阿尔茨海默病早期风险预测
- 新型细菌防御系统机制
技术亮点:
- 发现肠道细菌导致结直肠癌的关键分子通路。
- 开发出基于血液标志物的阿尔茨海默病风险评估方法。
- 揭示一种与已知机制完全相反的细菌防御系统。
📚 分类浏览
🧬 数据前沿 (85条)
详细内容(前10条)
1. ⭐ GSE316410 线粒体复合物 I 通过赋予微卫星稳定型结直肠癌铁死亡抵抗力来促进免疫逃逸 [scRNA-seq]
- ✍️ 作者:未知作者
- 🏷️ 关键词:cancer、immune、resistance、scRNA
- 📝 描述:Contributors : Xiaojun Zhou ; Xiang ZhaiSeries Type : Expression profiling by high throughput sequencingOrganism : Mus musculusWe discovered, through mining TCGA data and conducting CRISPR screens, that mitochondrial complex I promotes immune evasion in microsatellite stable colorectal cancer. To explore the role of mitochondrial complex I in regulating the immune microenvironment, we treated subcutaneous CT26 Cell transplant tumour with targeted mitochondrial complex I inhibitor IACS-010759 and performed scRNA-Seq
- 🔗 查看原文
2. ⭐ GSE247842 单细胞 RNA 测序揭示甲基苯丙胺对肝脏免疫反应的抑制作用,其中 DRD1 参与其中 [scRNA-Seq]
- ✍️ 作者:未知作者
- 🏷️ 关键词:immune、sequencing、single-cell、scRNA
- 📝 描述:Contributors : Jin-ting Zhou ; Yungang Xu ; Xiao-Huan Liu ; Cheng Cheng ; Jing-na FanSeries Type : Expression profiling by high throughput sequencingOrganism : Mus musculusMethamphetamine (METH) has been found to induce various physical and psychological changes, as well as damage to the immune system. The liver, which houses a significant number of immune cells, is particularly susceptible to the toxic effects of METH. Dopamine, an important neurotransmitter in both METH addiction and immune regulation, plays a crucial role in this process. In our study, we developed a chronic METH administration model and conducted single-cell RNA sequencing to investigate the impact of METH on liver immune cells and the involvement of the dopamine receptor D1 (DRD1) in this process.
- 🔗 查看原文
3. ⭐ GSE352390 人类口腔鳞状细胞癌肿瘤的单细胞RNA测序
- ✍️ 作者:未知作者
- 🏷️ 关键词:carcinoma、sequencing、single-cell
- 📝 描述:Contributor : Minh Phuong DongSeries Type : Expression profiling by high throughput sequencingOrganism : Homo sapiensSingle-cell RNA sequencing was performed on tumor tissues from two patients with oral squamous cell carcinoma to characterize the tumor microenvironment and identify cell populations expressing IL10 and TNF-α.
- 🔗 查看原文
4. ⭐ GSE347840 巨噬细胞向肌成纤维细胞的转化可能是IgA肾病早期肾纤维化的潜在驱动因素:来自单细胞RNA测序分析的启示
- ✍️ 作者:未知作者
- 🏷️ 关键词:macrophage、sequencing、single-cell
- 📝 描述:Contributors : Guo Jing ; Luo Chenggong ; Adele Yelizha ; Tang Yuyan ; He Haidong ; Yu ChenSeries Type : Expression profiling by high throughput sequencingOrganism : Homo sapiensBackground: IgA nephropathy (IgAN) is a leading cause of chronic kidney disease (CKD) and renal failure. Renal tubulointerstitial fibrosis is a predictor of a poor kidney outcome, and macrophages are involved into this process. However, the precise phenotyping mechanisms of macrophages at the early stage of IgAN, particularly how they initiate fibrogenesis, remain largely unknown. Methods: Single-cell RNA sequencing analysis was conduct on renal biopsy specimens from IgAN patients, as well as membranous nephropathy (MN) control samples and adjacent healthy kidney control samples from the public GEO database. After quality control and batch correction, unsupervised clustering, differential expression analysis and pathway enrichment analysis were carried out. Subsequently, an IgAN mouse model was established to investigate the fibrosis severity and potential mechanism. Results: Single-cell transcriptomic analysis revealed changes in the renal immune microenvironment in IgAN, characterized by an increase in macrophages and fibroblasts and a decrease in proximal tubular cells. Macrophages in IgAN exhibit M2 phenotyping, with high expression of CD163 and low expression of Fc gamma receptor IIIa (FCGR3A). In the IgAN mouse model, histological staining confirmed interstitial extracellular matrix (ECM) deposition. Immunostaining for F4/80 and α-SMA found a substantial population of F4/80+α-SMA+ cells in lesions of interstitial fibrosis in IgAN mouse model kidneys, whereas few or no such cells were seen in control groups. Furthermore, transcriptomic analysis revealed significant upregulation of the cytoskeletal protein Septin7 in IgAN macrophages, and Septin7 co-localized with α-SMA⁺ cells. Conclusions: Patients with early-stage renal fibrosis in IgA nephropathy exhibit prominent infiltration of M2-polarized macrophages, consistent with a macrophage-to-myofibroblast transition (MMT) process. Here, we identified Septin7 as a potential biomarker that is upregulated in IgAN kidneys and spatially associated with fibrotic severity, suggesting a potential role in the initial of fibrotic process.
- 🔗 查看原文
5. ⭐ GSE346656 肿瘤浸润性 NY-ESO-1 TCR-T 细胞的单细胞 RNA 测序,这些细胞具有 WT 或 ITAM M3 CD3ζ
- ✍️ 作者:未知作者
- 🏷️ 关键词:tumor、sequencing、single-cell
- 📝 描述:Contributors : Haopeng Wang ; Kun Wang ; Wen HuangSeries Type : Expression profiling by high throughput sequencingOrganism : Homo sapiensWe performed single-cell RNA sequencing to characterize the transcriptional states of tumor-infiltrating NY-ESO-1-specific TCR-T cells expressing wild-type (WT) CD3ζ or the ITAM M3 CD3ζ variant. Human primary T cells were engineered to express the NY-ESO-1 TCR together with WT or ITAM M3 CD3ζ and adoptively transferred into NSG mice bearing A375 human melanoma xenografts. Tumor-infiltrating lymphocytes (TILs) were isolated 10 days after TCR-T cell infusion. For each condition, TILs from three mice were pooled before single-cell RNA sequencing using the BD Rhapsody platform. The dataset was generated to investigate how ITAM M3-mediated recalibration of TCR signaling affects TCR-T cell functional state, including activation, cytotoxicity, exhaustion, proliferation, and stemness within the tumor microenvironment.
- 🔗 查看原文
6. ⭐ GSE330794 胶质瘤病毒疗法的临床反应与免疫组织和 T 细胞多样性有关。
- ✍️ 作者:未知作者
- 🏷️ 关键词:immune、T cell、glioma
- 📝 描述:Series Type : OtherOrganism : Homo sapiens ; Mesocricetus auratusThis SuperSeries is composed of the SubSeries listed below.
- 🔗 查看原文
7. ⭐ GSE317206 哺乳动物神经系统发育中的神经元染色质重塑因子 [ChIP-Seq]
- ✍️ 作者:未知作者
- 🏷️ 关键词:nervous、Neuronal、ChIP-seq
- 📝 描述:Contributors : Alyssa Ialongo ; Ssu-Yu Yeh ; Kaitlin Montanera ; Ho Sung RheeSeries Type : Genome binding/occupancy profiling by high throughput sequencingOrganism : Mus musculusNeuronal differentiation requires the precise regulation of neural lineage commitment genes, whose expression can be regulated through various epigenetic mechanisms such as chromatin remodeling. Integration of neuron-specific subunits of the mammalian Brg1-associated factor (BAF) chromatin remodeling complex enables the transcriptional regulation of neural lineage commitment genes, which is required for proper neurodevelopment. Here, we demonstrate that neuron-specific BAF chromatin remodling subunits are required for the transcriptional regulation of neuronal genes during nervous system development.
- 🔗 查看原文
8. ⭐ GSE315848 哺乳动物神经系统发育中的神经元染色质重塑因子 [ATAC-Seq]
- ✍️ 作者:未知作者
- 🏷️ 关键词:nervous、Neuronal、ATAC-seq
- 📝 描述:Contributors : Alyssa Ialongo ; Ho Sung RheeSeries Type : Genome binding/occupancy profiling by high throughput sequencingOrganism : Mus musculusNeuronal differentiation requires the precise regulation of neural lineage commitment genes, whose expression can be regulated through various epigenetic mechanisms such as chromatin remodeling. Integration of neuron-specific subunits of the mammalian Brg1-associated factor (BAF) chromatin remodeling complex enables the transcriptional regulation of neural lineage commitment genes, which is required for proper neurodevelopment. Here, we demonstrate that neuron-specific BAF chromatin remodling subunits are required for the transcriptional regulation of neuronal genes during nervous system development.
- 🔗 查看原文
9. ⭐ GSE315747 哺乳动物神经系统发育中的神经元染色质重塑因子 [RNA-seq]
- ✍️ 作者:未知作者
- 🏷️ 关键词:nervous、Neuronal、RNA-seq
- 📝 描述:Contributors : Alyssa Ialongo ; Ssu-Yu Yeh ; Ho Sung RheeSeries Type : Expression profiling by high throughput sequencingOrganism : Mus musculusNeuronal differentiation requires the precise regulation of neural lineage commitment genes, whose expression can be regulated through various epigenetic mechanisms such as chromatin remodeling. Integration of neuron-specific subunits of the mammalian Brg1-associated factor (BAF) chromatin remodeling complex enables the transcriptional regulation of neural lineage commitment genes, which is required for proper neurodevelopment. Here, we demonstrate that neuron-specific BAF chromatin remodling subunits are required for the transcriptional regulation of neuronal genes during nervous system development.
- 🔗 查看原文
10. ⭐ GSE313934 线粒体复合物 I 通过赋予微卫星稳定型结直肠癌铁死亡抵抗力来促进免疫逃逸
- ✍️ 作者:未知作者
- 🏷️ 关键词:cancer、immune、resistance
- 📝 描述:Contributors : Xiaojun Zhou ; Xiang ZhaiSeries Type : Expression profiling by high throughput sequencingOrganism : Mus musculusWe discovered, through mining TCGA data and conducting CRISPR screens, that mitochondrial complex I promotes immune evasion in microsatellite stable colorectal cancer. To explore the role of mitochondrial complex I in regulating the immune microenvironment, we treated CT26 cell line with targeted mitochondrial complex I inhibitor IACS-010759 and performed RNA-Seq
- 🔗 查看原文
💡 该来源还有 75 条内容,详见 文末
🧪 博客更新 (3条)
详细内容(全部3条)
1. ⭐ 科学家最终发现一种常见的肠道细菌如何引发结肠癌
- ✍️ 作者:未知作者
- 🏷️ 关键词:cancer、regex:bacter(ia|ial|ium)、gut、regex:gut(-?microbiome)?
- 📝 描述:Scientists at Johns Hopkins have uncovered a crucial missing link between a common gut bacterium and colorectal cancer, solving a mystery that has puzzled researchers for nearly two decades. The bacterium, Bacteroides fragilis, produces a toxin that damages the colon’s protective lining, triggers chronic inflammation, and promotes tumor formation.
- 🔗 查看原文
2. 简单的血液检测可以在症状出现前10年揭示患阿尔茨海默病的风险。
- ✍️ 作者:未知作者
- 🏷️ 关键词:Alzheimer
- 📝 描述:A major international study found that a simple blood test could help predict Alzheimer’s-related cognitive decline years before symptoms appear, with the highest-risk individuals facing a 38% chance of impairment within five years and an estimated 78% chance within 10 years. Scientists believe the discovery could pave the way for earlier intervention and future treatments designed to prevent Alzheimer’s before memory problems begin.
- 🔗 查看原文
3. 科学家发现了一种极其奇特的细菌防御机制,他们一度以为这种机制已经失效。
- ✍️ 作者:未知作者
- 🏷️ 关键词:regex:bacter(ia|ial|ium)
- 📝 描述:Scientists have discovered a bizarre bacterial defense system that works almost completely backward from anything seen before. Unlike typical bacterial immune systems that keep a deadly toxin under control until a virus attacks, this unusual mechanism waits until an infection begins before producing the DNA that switches on its lethal weapon. The infected bacterium then destroys itself, preventing the virus from multiplying and spreading to neighboring cells.
- 🔗 查看原文
📊 关键词统计
| 关键词 | 出现次数 |
|---|---|
| sequencing | 18 |
| RNA-seq | 14 |
| single-cell | 13 |
| immune | 10 |
| transcriptome | 6 |
| methylation | 6 |
| cancer | 5 |
| macrophage | 5 |
| resistance | 5 |
| epigenetic | 4 |
| nervous | 4 |
| genome | 4 |
| regex:bacter(ia | ial |
| carcinoma | 3 |
| tumor | 3 |
| immunity | 3 |
| Neuronal | 3 |
| Alzheimer | 2 |
| cardiac | 2 |
| spatial | 2 |
📎 更多内容
🧬 数据前沿 其他内容 (75条)
- GSE247843 单细胞 RNA 测序揭示甲基苯丙胺通过 DRD1 参与抑制肝脏免疫反应
- GSE247840 单细胞 RNA 测序揭示甲基苯丙胺对肝脏免疫反应的抑制作用,其中 DRD1 参与其中 [bulkRNA-Seq]
- GSE243378 百日咳毒素诱导的淋巴细胞增多症通过促进抗肿瘤免疫环境,提高了鳞状细胞癌体内模型中抗PD-1治疗的疗效
- GSE352334 草莓中产生小RNA的转座元件作为基因表达和表型特征的表观遗传调控因子[RNA-seq]
- GSE352326 人类口腔鳞状细胞癌肿瘤的批量RNA测序
- GSE352283 单细胞分析揭示驱动肌筋膜触发点细胞外基质重塑的成纤维细胞-巨噬细胞串扰网络
- GSE351385 小鼠肺单细胞RNA测序(HAdV-3和HAdV-7感染后)
- GSE350826 儿童神经炎症性疾病中免疫和胶质细胞多样性的单核定位:原发性中枢神经系统血管炎和拉斯穆森脑炎
- GSE350377 黑色素瘤患者循环TIGIT+ CD8+ T细胞的单细胞RNA和TCR测序
- GSE344283 Delta-8-四氢大麻酚通过调节先天免疫细胞极化(涉及表观遗传改变)来减轻小鼠结肠炎
- GSE343834 OCI-AML2 急性髓系白血病细胞中 UBE2E3 敲低(RNA-seq)
- GSE337607 人类基底神经节染色质状态和转录组的单细胞多组分析
- GSE337562 乳酸菌对乳腺炎相关金黄色葡萄球菌生物膜的转录组重编程和置换
- GSE324214 动态 DNA 甲基化变化协调番木瓜感染巴巴科花叶病毒 (BabMV) 后的代谢和氧化还原重编程
- GSE310117 MYC驱动的B细胞淋巴瘤中MYSM1催化活性的丧失
- GSE300315 RAD21 缺失导致内皮细胞染色质重连,重新分布全基因组 FLI1 结合位点 [RNA-seq]
- GSE282011 H3K18la 在内皮细胞中促进肿瘤免疫抑制
- GSE281661 癌症相关成纤维细胞METTL3驱动的巨噬细胞极化:利用巨噬细胞-成纤维细胞转化支持癌症进化
- GSE280907 MAGO蛋白在玉米雌性生殖发育过程中调控DNA甲基化[小RNA测序]
- GSE280906 MAGO蛋白在玉米雌性生殖发育过程中调节DNA甲基化[RNA-seq]
- GSE270927 单细胞 RNA-Seq 分析辐射诱导皮肤损伤过程中的分子变化:Nur77 的放射防护作用
- GSE246728 全蛋白质组筛选鉴定出钙结合蛋白 S100A8/S100A9 是主动脉夹层中具有临床意义的治疗靶点:一项转化研究 [RNA-seq]
- GSE352474 暴露于反式肉桂醛的秀丽隐杆线虫的RNA测序
- GSE352427 线虫捕食真菌寡孢节丛孢菌中Aoskn7的转录组分析
- GSE352416 阿尔茨海默病小鼠S1P信号通路遗传和药理学调控后皮层基因表达的转录组分析
- GSE352363:4周龄Nfe2l1肌肉特异性敲除小鼠和floxed对照小鼠小腿骨骼肌的单核RNA测序
- GSE352362:Nfe2l1肌肉特异性敲除小鼠经罗利普兰治疗后股四头肌RNA测序
- GSE352361:雷帕霉素治疗后Nfe2l1肌肉特异性敲除小鼠的骨骼肌RNA测序
- GSE352359:20周龄Nfe2l1肌肉特异性敲除小鼠和floxed对照小鼠小腿骨骼肌的批量RNA测序
- GSE352356 马凡综合征患者动脉瘤主动脉组织的单细胞分析揭示了TGF-β信号传导功能障碍
- GSE352336 草莓中产生小RNA的转座元件作为基因表达和表型性状的表观遗传调控因子
- GSE352330 草莓中产生小RNA的转座元件作为基因表达和表型特征的表观遗传调控因子[smallRNA-seq]
- GSE352266 暴露于慢性缺氧环境的雌性黑腹果蝇卵巢RNA测序
- GSE352263 去甲肾上腺素诱导的Takotsubo样心肌病模型大鼠心肌的时间序列RNA测序
- GSE352257 睡眠障碍通过激活交感神经去甲肾上腺素-巨噬细胞坏死轴加重药物性肝损伤
- GSE352145 E13.5 WT 和 Osr2-creKI;Rosa26R-Fgf8 小鼠腭部的批量 RNA 测序
- GSE351462 心肌梗死小鼠模型中药物抑制FKBP5后心脏巨噬细胞的转录组分析
- GSE349637 脓肿分枝杆菌 EsxUT 通过 GRP78-IRE1α 信号轴破坏 TFEB 依赖的溶酶体宿主防御 [RNA-seq]
- GSE349428 不同二氧化碳浓度下海洋微拟球藻的全转录组重编程
- GSE347496 线虫捕食真菌寡孢节丛孢菌中AoPEX3和AoPEX2的转录组分析
- GSE345193 原发性和转移性前列腺活检的空间表观基因组分析
- GSE344998 TSL 磷酸化的 SGS3 将 RDR6 从末端核苷酸转移酶活性转变为聚合酶活性,从而促进 RNAi 和免疫 [smallRNA-Seq]
- GSE344988 TSL 磷酸化的 SGS3 将 RDR6 从末端核苷酸转移酶活性转变为聚合酶活性,从而促进 RNAi 和免疫 [mRNA]
- GSE344305 E15.5小鼠前脑在Chd3 W1210R基因型中的单细胞转录组分析
- GSE343022 MAPK 输出与谱系特性相结合,定义了 EGFR 突变型肺腺癌中奥希替尼耐药的模式
- GSE343021 系统分析揭示了新型隐球菌中 Mln1 依赖的代谢灵活性和耐热性之间的权衡
- GSE342824 MAPK 输出与谱系身份的耦合定义了 EGFR 突变肺腺癌中奥希替尼耐药的模式 [Xenium 原位]
- GSE334110 珊瑚微群落不同共生体密度区域间的昼夜基因表达空间分布
- GSE329656 PARG 抑制通过 NRF2 依赖性通路转录激活来抑制破骨细胞分化
- GSE329235 SMG1抑制下原代肺细胞类型的RNA测序
- GSE329234 SMG1抑制下原代肺细胞类型的短读长RNA测序
- GSE329233 SMG1抑制下原代肺细胞类型的PacBio IsoSeq长读长RNA测序
- GSE328494 xCT (SLC7A11) 调节人类角质形成细胞中的 I 型干扰素反应和抗病毒免疫
- GSE327692:在人类体细胞单倍体细胞中利用 Eg5 抑制剂进行全基因组 CRISPR 激活筛选
- GSE313265 巨噬细胞中 PAD4 瓜氨酸化的细胞内在效应驱动炎症性关节炎
- GSE312437 靶向叶酸依赖性嘌呤合成可通过抑制糖酵解使黑色素瘤细胞对免疫攻击更加敏感
- GSE312097 超延伸复合物通过自我增强的转录回路驱动集体细胞迁移 [RNA-seq]
- GSE312094 超延伸复合物通过自我增强的转录回路驱动集体细胞迁移 [ChIP-seq]
- GSE311512 RNA测序数据,包括用重组CXCL12蛋白处理的TCam-2、GCT72、1411H、BeWo、RT-112和ACHN细胞。
- GSE311432 RNA测序数据包括CLDN6缺陷型TCam-2、2102EP、NCCIT和JAR细胞以及CLDN6分选的GCT72细胞及其亲代对照细胞。
- GSE310698 钩虫重组蛋白AIP-2具有促耐受性,可预防TNBS诱导的结肠炎并抑制与结直肠癌发展相关的基因
- GSE310405 四溴双酚A (TBBPA) 扰乱早期胚胎发育轨迹 - 24 hpf 测序数据
- GSE309996 5日龄和20日龄小鼠未分级IWAT脂肪库的转录组
- GSE309865 SARS-CoV-2 核衣壳蛋白或刺突蛋白对人单核细胞衍生巨噬细胞的影响
- GSE300316 RAD21 缺失导致内皮细胞染色质重连,重新分布全基因组 FLI1 结合 [CUT&Tag]
- GSE292469 MAPK 输出与谱系身份的耦合定义了 EGFR 突变肺腺癌中奥希替尼耐药的模式 [snRNA-seq]
- GSE291372 未折叠蛋白传感器IRE1在巨噬细胞对凋亡细胞吞噬反应中的作用
- GSE283131 HOPSX过表达或HOPSX敲除与对照组小鼠ICN-1细胞单细胞RNA测序
- GSE281647 MAGO蛋白在玉米雌性生殖发育过程中调节DNA甲基化。
- GSE280905 MAGO蛋白在玉米雌性生殖发育过程中调节DNA甲基化[BS-seq]
- GSE280864 TMAO刺激肾小管细胞分泌CXCL12,加剧肾脏炎症
- GSE249612 一项基于人类诱导多能干细胞阵列的全基因组关联研究发现了一种与胰岛β细胞对脂毒性的敏感性相关的功能变异
- GSE217799:COVID-19住院患者和健康对照者外周血单核细胞中与心脏相关的长链非编码RNA谱分析
- GSE190423 根据DNA甲基化亚组分析胶质母细胞瘤患者生存的分子预测因子
- GSE161069 对 ABA 信号时间响应基因的转录组分析
📅 报告生成时间:2026-11-02 00:54
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